Last updated: 2018-06-04

workflowr checks: (Click a bullet for more information)

• ✔ R Markdown file: up-to-date

  Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

• ✔ Repository version: 340ad6f

  Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.
  
  Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

  
  Ignored files:
      Ignored:    .sos/
      Ignored:    data/.sos/
      Ignored:    output/MatrixEQTLSumStats.Portable.Z.coved.K3.P3.lite.single.expanded.V1.loglik.rds
      Ignored:    workflows/.ipynb_checkpoints/
      Ignored:    workflows/.sos/
  
  Untracked files:
      Untracked:  fastqtl_to_mash_output/
      Untracked:  gtex6_workflow_output/
  
  

  Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

Expand here to see past versions:

File	Version	Author	Date	Message
Rmd	340ad6f	Peter Carbonetto	2018-06-04	wflow_publish(c(“index.Rmd”, “gtex.Rmd”, “fastqtl2mash.Rmd”))
Rmd	bc422e7	Peter Carbonetto	2018-06-01	Minor change to homepage.
Rmd	6a456e6	Peter Carbonetto	2018-06-01	Moved some output files to data folder; removed some old files from
html	165554d	Peter Carbonetto	2018-06-01	Moved details of GTEx analysis away from home page.
Rmd	7e3cfc7	Peter Carbonetto	2018-06-01	wflow_publish(“index.Rmd”)
html	da644a1	Peter Carbonetto	2018-06-01	Re-built home page with new navbar.
Rmd	515985c	Peter Carbonetto	2018-06-01	wflow_publish(“index.Rmd”)
html	dad17f3	Peter Carbonetto	2018-06-01	This is a new, pared-down version of the home page.
Rmd	fbc54f1	Peter Carbonetto	2018-06-01	wflow_publish(“index.Rmd”)
Rmd	2945c3d	Peter Carbonetto	2018-05-31	Removed most of the materials from the README.
Rmd	bd60ada	Gao Wang	2018-05-31	Change workflow output folder
Rmd	380046f	Peter Carbonetto	2018-05-22	Working on improvements to Fig.GTExExamples.Rmd.
Rmd	d9994cf	Peter Carbonetto	2018-05-16	A few very minor misc. changes.
Rmd	3431f02	Peter Carbonetto	2018-05-14	wflow_publish(“index.Rmd”)
Rmd	ea42e8a	Peter Carbonetto	2018-05-07	Added step to install packages in instructions (index.Rmd).
Rmd	6ebb3f9	Peter Carbonetto	2018-05-07	wflow_publish(“index.Rmd”)
Rmd	c6c8450	Peter Carbonetto	2018-05-07	Setting up workflowr settings.
html	c6c8450	Peter Carbonetto	2018-05-07	Setting up workflowr settings.
Rmd	33f72d6	Peter Carbonetto	2018-05-07	Added workflowr 1.0.1.9000 files.
html	b4e38c2	Gao Wang	2017-09-20	Fix one more broken link
html	80f285f	Gao Wang	2017-09-20	Update figures
html	afc401f	Peter Carbonetto	2017-09-20	Moved doc to docs.

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This reproducible R Markdown analysis was created with workflowr 1.0.1.9000

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