Last updated: 2018-11-17

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• ✔ R Markdown file: up-to-date

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• ✔ Repository version: afbb687

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  Ignored files:
      Ignored:    .DS_Store
      Ignored:    .Rhistory
      Ignored:    .Rprofile
      Ignored:    .Rproj.user/
      Ignored:    .sos/
      Ignored:    analysis/.DS_Store
      Ignored:    analysis/.sos/
      Ignored:    dsc/.DS_Store
      Ignored:    dsc/.sos/
      Ignored:    dsc/benchmark/.DS_Store
      Ignored:    dsc/modules/.DS_Store
  
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  Unstaged changes:
      Modified:   dsc/benchmark.dsc
      Deleted:    dsc/benchmark.query.R
      Modified:   dsc/benchmark/benchmark.conf.mpk
      Modified:   dsc/benchmark/benchmark.db
      Modified:   dsc/benchmark/benchmark.map.mpk
      Modified:   dsc/modules/get_data.dsc
      Deleted:    dsc/modules/glm.dsc
      Modified:   dsc/modules/methodsMeanExpression.R
      Modified:   dsc/modules/methodsMeanExpression.dsc
      Deleted:    dsc/modules/run_DESeq2.R
      Deleted:    dsc/modules/run_DESeq2.dsc
      Deleted:    dsc/modules/t_test.dsc
      Deleted:    dsc/modules/wilcox_test.dsc
  
  

  Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

Expand here to see past versions:

File	Version	Author	Date	Message
Rmd	afbb687	jhsiao999	2018-11-16	add DESeq2
html	5dd99de	jhsiao999	2018-11-15	Build site.
Rmd	c3707b4	jhsiao999	2018-11-15	prelim results on two-sample tests
html	a85bfe7	jhsiao999	2018-11-15	add back htmls
Rmd	0cc76ea	jhsiao999	2018-11-15	first commit
Rmd	2dd4a18	jhsiao999	2018-11-15	Start workflowr project.

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Project website for benchmarking methods for single-cell DE methods.

First, consider

• Investigate Type I error control

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This reproducible R Markdown analysis was created with workflowr 1.1.1

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