Posterior Inference with Gaussian Derivative Likelihood: Initial Simulations

Last updated: 2018-05-12

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source("../code/gdash_lik.R")

sebetahat = readRDS("../output/sebetahat_null_liver_777.rds")
z = readRDS("../output/z_null_liver_777.rds")
m = nrow(z)
n = ncol(z)

pi0 = 0.99
effect_strength = 3

sessionInfo()

R version 3.4.3 (2017-11-30)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS High Sierra 10.13.4

Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] ashr_2.2-2        Rmosek_8.0.69     PolynomF_1.0-1    CVXR_0.95        
[5] REBayes_1.2       Matrix_1.2-12     SQUAREM_2017.10-1 EQL_1.0-0        
[9] ttutils_1.0-1    

loaded via a namespace (and not attached):
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[10] digest_0.6.15     bit_1.1-12        evaluate_0.10.1  
[13] lattice_0.20-35   foreach_1.4.4     yaml_2.1.18      
[16] parallel_3.4.3    Rmpfr_0.6-1       ECOSolveR_0.4    
[19] stringr_1.3.0     knitr_1.20        rprojroot_1.3-2  
[22] bit64_0.9-7       grid_3.4.3        R6_2.2.2         
[25] rmarkdown_1.9     magrittr_1.5      whisker_0.3-2    
[28] MASS_7.3-47       backports_1.1.2   codetools_0.2-15 
[31] htmltools_0.3.6   scs_1.1-1         stringi_1.1.6    
[34] pscl_1.5.2        doParallel_1.0.11 truncnorm_1.0-7  
[37] R.oo_1.21.0      

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